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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs35794776 chr2:109408159 G/T 3.16E-12 508 37.75 26.17 2.3 KM Plot
KIRC rs35802497 chr3:48345449 A/T 7.7E-6 504 37.6 37.77 19.13 KM Plot
KIRC rs35855235 chr4:169164060 G/A 2.27E-8 507 37.18 38.45 3.1 KM Plot
KIRC rs35944878 chr3:48323364 T/C 0.000114 496 37.9 36.93 19.13 KM Plot
KIRC rs35973596 chr4:169166029 T/TA 2.41E-8 504 37.37 38.45 3.1 KM Plot
KIRC rs35974605 chr3:48280170 AAGG/A 1.76E-5 502 37.7 37.47 19.13 KM Plot
KIRC rs36012762 chr6:25980523 A/C 1.42E-8 502 37.6 36.87 3.37 KM Plot
KIRC rs36020562 chr3:48258638 A/G 1.46E-5 496 37.75 37.6 21.12 KM Plot
KIRC rs36064160 chr3:48243101 C/G 1.06E-5 494 37.7 37.6 21.12 KM Plot
KIRC rs36075665 chr3:48343087 C/T 7.8E-6 502 37.67 37.77 19.13 KM Plot
KIRC rs36098430 chr2:67634126 A/G 2.2E-7 507 37.33 37.7 2.03 KM Plot
KIRC rs36121690 chr3:48345511 C/T 7.7E-6 503 37.67 37.77 19.13 KM Plot
KIRC rs36126531 chr12:29427151 G/A 4.06E-9 508 37.67 35.48 6.07 KM Plot
KIRC rs366924 chr16:23633928 A/T 1.28E-8 504 37.47 37.47 1.62 KM Plot
KIRC rs367811372 chr2:109470437 AT/A 5.55E-13 500 37.73 26.92 2.3 KM Plot